STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHACTR3Phosphatase and actin regulator. (560 aa)    
Predicted Functional Partners:
TMA16
Translation machinery-associated protein 16.
      
 0.766
PHYHIPL
phytanoyl-CoA hydroxylase-interacting protein-like.
   
  
 0.737
DPYSL4
Dihydropyrimidinase-related protein 4.
      
 0.721
SYTL2
Synaptotagmin-like protein 2 isoform X1.
     
 0.700
CACNA1I
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
      
 0.640
ARRDC2
Arrestin domain-containing protein 2 isoform X1.
      
 0.632
SMIM17
Small integral membrane protein 17.
      
 0.616
LOC101363423
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.611
TMEM214
Transmembrane protein 214.
      
 0.605
PLIN4
Perilipin-4.
      
 0.528
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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