STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LY6G6CLOW QUALITY PROTEIN: lymphocyte antigen 6 complex locus protein G6c. (183 aa)    
Predicted Functional Partners:
LOC101364362
Galectin-7.
   
    0.772
HAT1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
      
 0.597
ITFG1
T-cell immunomodulatory protein isoform X1.
      
 0.524
PLXDC1
Plexin domain-containing protein 1.
      
 0.521
GDPD2
Glycerophosphoinositol inositolphosphodiesterase GDPD2 isoform X1.
      
 0.470
ASB16
Ankyrin repeat and SOCS box protein 16.
     
 0.460
MTMR10
Myotubularin-related protein 10.
      
 0.456
SLC44A4
Choline transporter-like protein 4; Belongs to the CTL (choline transporter-like) family.
      
 0.455
CDH18
Cadherin-18 isoform X1; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.454
LOC101384684
LOW QUALITY PROTEIN: olfactory receptor 6K6-like.
      
 0.447
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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