STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC61GLOW QUALITY PROTEIN: protein transport protein Sec61 subunit gamma. (108 aa)    
Predicted Functional Partners:
SEC61B
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.996
SEC61A1
Protein transport protein Sec61 subunit alpha isoform 1.
   
 0.985
SEC61A2
Protein transport protein Sec61 subunit alpha isoform 2 isoform X1.
   
 0.985
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.957
RPL38
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.951
RPL27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
   0.950
RPL36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
   0.949
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.947
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
  
   0.945
RPL22
60S ribosomal protein L22.
   
 
 0.944
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.