STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1C1Solute carrier organic anion transporter family member. (712 aa)    
Predicted Functional Partners:
SLC7A5
Large neutral amino acids transporter small subunit 1.
   
  
 0.654
SLC16A10
Monocarboxylate transporter 10.
   
 
 0.646
SLC16A2
Monocarboxylate transporter 8.
   
 
 0.646
LIX1
Protein limb expression 1 homolog.
   
  
 0.643
FADS6
Fatty acid desaturase 6.
      
 0.621
UPRT
Uracil phosphoribosyltransferase homolog.
      
 0.610
SLC7A1
High affinity cationic amino acid transporter 1.
   
  
 0.609
NTSR2
Neurotensin receptor type 2; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.552
APCDD1
Protein APCDD1.
      
 0.523
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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