STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101383856Lysine-specific demethylase 6A isoform X1. (1278 aa)    
Predicted Functional Partners:
LOC101382815
Histone H3; Belongs to the histone H3 family.
   
 0.983
BIRC6
Baculoviral IAP repeat-containing protein 6.
   
 0.937
LOC101373846
Histone H3; Belongs to the histone H3 family.
   
 0.937
ASH2L
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.937
H3F3B
Histone H3; Belongs to the histone H3 family.
   
 0.935
LOC101386168
Histone H3; Belongs to the histone H3 family.
   
 0.935
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.935
LOC101386674
Lysine-specific demethylase 6A isoform X1.
  
 
0.926
ATP5A1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.925
LOC105758055
Lysine-specific demethylase 6A-like.
 
  
 0.925
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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