STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101377259Ankyrin-1. (1805 aa)    
Predicted Functional Partners:
CD44
CD44 antigen.
   
 
 0.923
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1 isoform X1.
    
 0.913
TIAM1
T-lymphoma invasion and metastasis-inducing protein 1 isoform X1.
    
 0.911
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.909
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3 isoform X1.
    
 0.909
ANK2
Ankyrin-2 isoform X1.
  
  
 
0.901
ANK3
Ankyrin-3 isoform X1.
     
 
0.900
LOC101372633
Ankyrin-1-like isoform X1.
 
    
 0.897
NFASC
Neurofascin isoform X1.
   
 0.780
RNF146
E3 ubiquitin-protein ligase RNF146.
    
 0.621
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.