STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LUC7L3Luc7-like protein 3 isoform X1. (489 aa)    
Predicted Functional Partners:
RBM25
RNA-binding protein 25.
   
 0.989
PNISR
Arginine/serine-rich protein PNISR isoform X1.
   
  
 0.913
PNN
Pinin isoform X1.
   
 
 0.899
RBM39
RNA-binding protein 39 isoform X2.
   
 0.894
SRSF11
Serine/arginine-rich splicing factor 11 isoform X1.
   
 
 0.864
SRRT
Serrate RNA effector molecule homolog.
   
 0.856
DDX5
Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family.
   
 0.847
SRRM2
Serine/arginine repetitive matrix protein 2.
   
 0.832
LOC101383928
LOW QUALITY PROTEIN: splicing factor 1-like.
   
 0.827
SF1
Splicing factor 1.
   
 0.827
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.