STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIRBPCold-inducible RNA-binding protein isoform X1. (185 aa)    
Predicted Functional Partners:
CLASRP
CLK4-associating serine/arginine rich protein isoform X1.
      
 0.751
TSEN34
tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]
    
 
 0.698
GABPB2
GA-binding protein subunit beta-2 isoform X1.
    
 
 0.663
LOC101385960
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.624
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.624
RIOK3
Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses.
   
 
 0.624
CELA1
Chymotrypsin-like elastase family member 1; Belongs to the peptidase S1 family.
    
 
 0.621
CHRAC1
Chromatin accessibility complex protein 1.
    
 
 0.600
PABPN1
Polyadenylate-binding protein 2.
  
 0.552
SRSF2
Serine/arginine-rich splicing factor 2.
  
0.549
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.