STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP6Receptor expression-enhancing protein. (184 aa)    
Predicted Functional Partners:
RP1L1
Retinitis pigmentosa 1-like 1 protein.
      
 0.751
RHBDD3
Rhomboid domain-containing protein 3.
      
 0.746
FAM118A
Protein FAM118A.
    
 
 0.734
TMEM39B
Transmembrane protein 39B.
      
 0.721
LETM2
LETM1 domain-containing protein LETM2, mitochondrial isoform X1.
      
 0.721
PSD2
PH and SEC7 domain-containing protein 2.
      
 0.715
DNAJC18
dnaJ homolog subfamily C member 18 isoform X1.
   
  
 0.683
ANKRD33B
Ankyrin repeat domain-containing protein 33B.
      
 0.662
PDE6B
Phosphodiesterase.
      
 0.643
SNX15
Sorting nexin-15.
    
   0.642
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.