STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP20Cilia- and flagella-associated protein 20 isoform X1. (203 aa)    
Predicted Functional Partners:
PACRG
Parkin coregulated gene protein.
    
 
 0.887
EFHC1
EF-hand domain-containing protein 1.
    
 
 0.885
EFHC2
EF-hand domain-containing family member C2.
    
 
 0.885
EFCAB6
EF-hand calcium-binding domain-containing protein 6.
    
 
 0.870
TEKT2
Tektin-2.
   
   0.870
RIBC2
RIB43A-like with coiled-coils protein 2.
    
 
 0.870
CFAP52
Cilia- and flagella-associated protein 52 isoform X1.
    
 
 0.869
EFCAB1
EF-hand calcium-binding domain-containing protein 1 isoform X1.
    
 
 0.868
SPAG8
LOW QUALITY PROTEIN: sperm-associated antigen 8.
    
   0.867
FAM166B
LOW QUALITY PROTEIN: protein FAM166B.
    
   0.867
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.