STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101383066Nuclear body protein SP140. (740 aa)    
Predicted Functional Partners:
FAM91A1
Protein FAM91A1.
      
 0.621
PAPSS2
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2.
     
 0.613
SUGCT
Succinate--hydroxymethylglutarate CoA-transferase.
      
 0.612
LOC101380249
Succinate--hydroxymethylglutarate CoA-transferase-like.
      
 0.612
BRD1
Bromodomain-containing protein 1 isoform X1.
    
 0.551
ATAD1
ATPase family AAA domain-containing protein 1; Belongs to the AAA ATPase family.
    
 
 0.527
COL24A1
Collagen alpha-1(XXIV) chain.
    
 
 0.526
BRPF3
Bromodomain and PHD finger-containing protein 3 isoform X1.
    
 0.498
BRPF1
Peregrin isoform X1.
    
 0.486
SRCAP
Helicase SRCAP.
    
 0.469
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.