STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3TC1SH3 domain and tetratricopeptide repeat-containing protein 1. (1330 aa)    
Predicted Functional Partners:
ABLIM2
Actin-binding LIM protein 2.
      
 0.846
LOC101362476
Protein EMSY isoform X1.
      
 0.828
SORCS2
VPS10 domain-containing receptor SorCS2.
      
 0.758
SH3TC2
SH3 domain and tetratricopeptide repeat-containing protein 2.
      
0.729
AFAP1
Actin filament-associated protein 1 isoform X1.
      
 0.704
ZBED1
Zinc finger BED domain-containing protein 1.
      
 0.634
KCNH6
Potassium voltage-gated channel subfamily H member 6 isoform X1.
      
 0.600
SHROOM2
Protein Shroom2.
      
 0.589
CACNG7
Voltage-dependent calcium channel gamma-7 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization. Shows specificity only for GRIA1 and GRIA2. Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
      
 0.525
CACNG5
Voltage-dependent calcium channel gamma-5 subunit.
      
 0.525
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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