STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101386266Regulatory solute carrier protein family 1 member 1 isoform X1. (1024 aa)    
Predicted Functional Partners:
RPS27A
ubiquitin-40S ribosomal protein S27a.
   
 
 0.824
RAD23B
UV excision repair protein RAD23 homolog B isoform X1.
   
 
 0.753
RAD23A
UV excision repair protein RAD23 homolog A isoform X1.
   
 
 0.753
PSMD14
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.711
UBC
polyubiquitin-C.
   
 
 0.675
LOC101386062
Ubiquitin-like.
   
 
 0.675
LOC101371369
Polyubiquitin.
   
 
 0.675
LOC101376426
Ubiquitin-like.
   
 
 0.675
PSMD2
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 
 0.640
UBA52
ubiquitin-60S ribosomal protein L40 isoform X1.
   
   0.618
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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