STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101380473Protocadherin alpha-4. (653 aa)    
Predicted Functional Partners:
PPFIA4
Liprin-alpha-4.
    
 
 0.461
LOC101385288
LOW QUALITY PROTEIN: trace amine-associated receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.454
APBA1
Amyloid beta A4 precursor protein-binding family A member 1.
      
 0.445
KCNH6
Potassium voltage-gated channel subfamily H member 6 isoform X1.
      
 0.439
PPP1R18
Phostensin.
      
 0.439
CMBL
Carboxymethylenebutenolidase homolog.
      
 0.438
BABAM1
BRISC and BRCA1-A complex member 1.
      
 0.438
DDRGK1
DDRGK domain-containing protein 1.
      
 0.437
TOPAZ1
LOW QUALITY PROTEIN: testis- and ovary-specific PAZ domain-containing protein 1.
      
 0.437
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.