STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKHD1Ankyrin repeat and KH domain-containing protein 1 isoform X1. (2576 aa)    
Predicted Functional Partners:
NIPBL
Nipped-B protein.
   
    0.634
MGA
MAX gene-associated protein isoform X1.
   
  
 0.615
LOC101363465
Uncharacterized protein C3orf67 homolog.
      
 0.611
SMARCA1
Probable global transcription activator SNF2L1 isoform X1.
   
    0.591
SMARCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
   
    0.591
KDM2A
Lysine-specific demethylase 2A isoform X1.
   
    0.534
SMG1
Serine/threonine-protein kinase SMG1 isoform X1; Belongs to the PI3/PI4-kinase family.
   
  
 0.516
PRRC2A
Protein PRRC2A.
   
 
 0.513
HELLS
Lymphoid-specific helicase isoform X1.
   
    0.489
LOC101368038
chromodomain-helicase-DNA-binding protein 1-like.
   
    0.489
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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