STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HARS2Probable histidine--tRNA ligase, mitochondrial isoform X1. (505 aa)    
Predicted Functional Partners:
HARS
histidine--tRNA ligase, cytoplasmic isoform X1.
  
 
0.913
EIF2S1
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.797
YARS
Tyrosine--tRNA ligase.
  
 
 0.796
DARS2
aspartate--tRNA ligase, mitochondrial.
  
  
 0.780
LARS2
Probable leucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.773
MARS2
methionine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.771
ERAL1
GTPase Era, mitochondrial.
  
  
 0.749
EPRS
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
 0.749
TARS
threonine--tRNA ligase, cytoplasmic isoform X1.
  
 
 0.739
TROVE2
60 kDa SS-A/Ro ribonucleoprotein isoform X1.
      
 0.725
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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