STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEX35Testis-expressed sequence 35 protein. (252 aa)    
Predicted Functional Partners:
TEX43
Testis-expressed sequence 43 protein.
      
 0.745
SPATA45
Spermatogenesis-associated protein 45.
      
 0.745
SPEM1
Spermatid maturation protein 1.
      
 0.693
SPERT
Spermatid-associated protein isoform X1.
      
 0.621
SPATC1
Speriolin.
      
 0.620
SPATA19
Spermatogenesis-associated protein 19, mitochondrial.
   
  
 0.557
SPATA18
Mitochondria-eating protein.
      
 0.525
FAM160B1
Protein FAM160B1.
      
 0.522
BLOC1S5
Biogenesis of lysosome-related organelles complex 1 subunit 5; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO).
    
   0.511
LETMD1
LETM1 domain-containing protein 1 isoform X1.
      
 0.452
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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