STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA21LOW QUALITY PROTEIN: spermatogenesis-associated protein 21. (763 aa)    
Predicted Functional Partners:
SPATA3
Spermatogenesis-associated protein 3.
    
 
 0.703
CASK
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.636
SPATA24
Spermatogenesis-associated protein 24.
      
 0.617
DNAJC4
dnaJ homolog subfamily C member 4 isoform X1.
      
 0.617
ADAM32
Disintegrin and metalloproteinase domain-containing protein 32.
      
 0.613
ANKEF1
Ankyrin repeat and EF-hand domain-containing protein 1.
   
 0.581
OAZ3
Ornithine decarboxylase antizyme 3.
   
  
 0.574
DNAJA4
dnaJ homolog subfamily A member 4.
    
 
 0.553
LOC101366848
Uncharacterized protein C14orf79 homolog.
      
 0.515
RPS15A
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
    
 
 0.515
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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