STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMS1LIM and senescent cell antigen-like-containing domain protein; Adapter protein in a cytoplasmic complex linking beta- integrins to the actin cytoskeleton, bridges the complex to cell surface receptor tyrosine kinases and growth factor receptors. (396 aa)    
Predicted Functional Partners:
RSU1
Ras suppressor protein 1 isoform X1.
   
 0.995
PARVB
Beta-parvin.
   
 0.933
PARVA
Alpha-parvin.
   
 0.929
PARVG
Gamma-parvin.
   
 0.895
ILK
Integrin-linked protein kinase isoform X1.
   
 0.859
LOC101375473
LOW QUALITY PROTEIN: uncharacterized protein LOC101375473.
   
 0.859
NCK2
Cytoplasmic protein.
    
 
 0.691
ASB12
Ankyrin repeat and SOCS box protein 12.
    
 0.674
PIDD1
P53-induced death domain-containing protein 1.
    
 0.655
GCC2
GRIP and coiled-coil domain-containing protein 2.
      
 0.606
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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