STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105757317Mucin-1-like. (774 aa)    
Predicted Functional Partners:
GP6
Platelet glycoprotein VI.
    
  0.910
COL3A1
Collagen alpha-1(III) chain.
    
  0.909
COL1A2
Collagen alpha-2(I) chain.
    
  0.909
COL1A1
Collagen alpha-1(I) chain.
    
  0.909
ITGA2
Integrin alpha-2; Belongs to the integrin alpha chain family.
    
  0.905
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
     
  0.904
CD44
CD44 antigen.
   
 
  0.900
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
  0.673
ITGA4
Integrin alpha-4; Belongs to the integrin alpha chain family.
    
  0.669
ITGAV
Integrin alpha-V isoform X1; Belongs to the integrin alpha chain family.
    
  0.669
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.