STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX1Protein CASP isoform X1. (678 aa)    
Predicted Functional Partners:
SATB2
DNA-binding protein SATB.
    
 
 0.868
PAX6
Paired box protein Pax-6 isoform X1.
    
 
 0.768
TBR1
T-box brain protein 1.
    
 
 0.751
NES
Nestin; Belongs to the intermediate filament family.
      
 0.721
GFAP
Glial fibrillary acidic protein isoform X1; Belongs to the intermediate filament family.
      
 0.708
FEZF2
Fez family zinc finger protein 2.
    
 
 0.694
SOX5
Transcription factor SOX-5 isoform X1.
      
 0.621
FOXP2
Forkhead box protein P2 isoform X1.
    
 
 0.619
CASP3
Caspase-3 isoform X1; Belongs to the peptidase C14A family.
      
 0.617
RORB
Nuclear receptor ROR-beta.
      
 0.542
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.