STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPHS2Podocin. (233 aa)    
Predicted Functional Partners:
SYNPO
Synaptopodin isoform X1.
     
 0.959
WT1
Wilms tumor protein isoform X1.
   
 0.949
CD2AP
CD2-associated protein.
   
 
 0.921
NPHS1
Nephrin.
    
 0.868
TRPC6
Short transient receptor potential channel 6 isoform X1; Belongs to the transient receptor (TC 1.A.4) family.
    
 
 0.791
ALB
Serum albumin.
      
 0.761
CDH3
Cadherin-3; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 0.734
ACTN4
Alpha-actinin-4 isoform X1.
    
 
 0.723
SLC12A1
Solute carrier family 12 member 1 isoform X1.
   
 
 0.673
LOC101372781
Mitochondrial chaperone BCS1; Belongs to the AAA ATPase family.
  
 0.672
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.