STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGN3High mobility group nucleosome-binding domain-containing protein 3 isoform X1. (171 aa)    
Predicted Functional Partners:
INO80E
INO80 complex subunit E isoform X1.
      
 0.529
PRDM7
Probable histone-lysine N-methyltransferase PRDM7.
      
 0.527
IKZF5
Zinc finger protein Pegasus.
      
 0.522
DRAP1
Dr1-associated corepressor isoform X1.
      
 0.522
LOC101368820
Non-histone chromosomal protein HMG-14.
  
  
0.458
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
      
 0.453
KLHL31
Kelch-like protein 31.
      
 0.451
INO80D
INO80 complex subunit D.
      
 0.442
LOC101365857
LOW QUALITY PROTEIN: uncharacterized protein LOC101365857.
      
 0.442
CBFA2T2
Protein CBFA2T2 isoform X1.
      
 0.439
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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