STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF11PHD finger protein 11. (351 aa)    
Predicted Functional Partners:
SETDB2
Histone-lysine N-methyltransferase SETDB2 isoform X1.
 
 
  
 0.857
ASH2L
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.620
LRRC16A
Leucine-rich repeat-containing protein 16A isoform X1.
      
 0.605
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
   
 0.579
EED
Polycomb protein EED isoform X1.
   
 0.566
PHF1
PHD finger protein 1 isoform X1.
   
 0.563
SUZ12
Polycomb protein SUZ12.
   
 0.546
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.516
LOC101382175
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.498
LOC101369784
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.498
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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