STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP54Cilia- and flagella-associated protein 54. (3108 aa)    
Predicted Functional Partners:
TMEM212
LOW QUALITY PROTEIN: transmembrane protein 212.
   
  
 0.946
TBX1
T-box transcription factor TBX1.
   
  
 0.785
ST6GALNAC6
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
   
    0.772
SPAG6
Sperm-associated antigen 6 isoform X1.
    
 
 0.739
SPEF2
Sperm flagellar protein 2.
   
 
 0.734
RCL1
RNA 3'-terminal phosphate cyclase-like protein isoform X1.
      
 0.714
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.711
POC1A
POC1 centriolar protein homolog A.
    
 
 0.632
PTPRR
Receptor-type tyrosine-protein phosphatase R isoform X1.
      
 0.618
ATP9B
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.609
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (28%) [HD]