STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC18Coiled-coil domain-containing protein 18. (1454 aa)    
Predicted Functional Partners:
KLHDC8A
Kelch domain-containing protein 8A.
      
 0.666
TMEM71
LOW QUALITY PROTEIN: transmembrane protein 71.
      
 0.617
PRADC1
Protease-associated domain-containing protein 1.
      
 0.612
CCDC14
Coiled-coil domain-containing protein 14 isoform X1.
   
 
 0.603
PRSS37
Probable inactive serine protease 37.
      
 0.570
RAB42
Putative Ras-related protein Rab-42.
    
 0.557
ABCD3
ATP-binding cassette sub-family D member 3 isoform X1.
      
 0.527
SFXN4
Sideroflexin-4.
      
 0.525
SLC44A5
Choline transporter-like protein 5; Belongs to the CTL (choline transporter-like) family.
      
 0.523
TULP2
LOW QUALITY PROTEIN: tubby-related protein 2; Belongs to the TUB family.
      
 0.521
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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