STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC149Coiled-coil domain-containing protein 149. (517 aa)    
Predicted Functional Partners:
LOC101366772
IQ and AAA domain-containing protein 1-like.
      
 0.640
ULK4
Serine/threonine-protein kinase ULK4.
      
 0.620
DLGAP1
Disks large-associated protein 1 isoform X1.
      
 0.528
ADGB
Androglobin; Belongs to the peptidase C2 family.
      
 0.528
PPP2R5C
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
      
 0.526
BOD1L1
Biorientation of chromosomes in cell division protein 1-like 1.
      
 0.523
LGI2
Leucine-rich repeat LGI family member 2.
 
    
 0.523
PDZD3
Na(+)/H(+) exchange regulatory cofactor NHE-RF4.
      
 0.523
SEPSECS
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
      
 0.522
ZCCHC4
Zinc finger CCHC domain-containing protein 4 isoform X1.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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