STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE1Nesprin-1. (8798 aa)    
Predicted Functional Partners:
SUN2
SUN domain-containing protein 2.
    
 0.993
SUN1
SUN domain-containing protein 1.
    
 0.972
SUN3
SUN domain-containing protein 3.
    
 0.922
SUN5
SUN domain-containing protein 5.
    
 0.897
LMNB1
lamin-B1 isoform X1; Belongs to the intermediate filament family.
    
 0.822
EMD
Emerin.
    
 
 0.790
LMNB2
lamin-B2; Belongs to the intermediate filament family.
    
 0.773
LMNA
Lamin isoform X1; Belongs to the intermediate filament family.
    
 0.757
SYNE4
Nesprin-4 isoform X1.
      
 0.654
ZC3H8
Zinc finger CCCH domain-containing protein 8.
      
 0.615
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.