STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC171Coiled-coil domain-containing protein 171. (1305 aa)    
Predicted Functional Partners:
LOC101380194
Protein DEPP.
      
 0.762
CLCN3
Chloride channel protein.
    
 
 0.634
PGBD1
piggyBac transposable element-derived protein 1.
    
 0.539
CCDC117
Coiled-coil domain-containing protein 117 isoform X1.
   
  
 0.478
PLA1A
Phospholipase A1 member A isoform X1.
    
 0.471
DENND4C
DENN domain-containing protein 4C.
      
 0.443
LOC101382722
A-kinase anchor protein 7 isoform gamma-like.
      
 0.441
SS18L1
Calcium-responsive transactivator.
      
 0.414
TEP1
Telomerase protein component 1.
    
 0.410
LOC101386840
Tetratricopeptide repeat protein GNN-like.
    
 0.404
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.