STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP3tRNA modification GTPase GTPBP3, mitochondrial isoform X1. (494 aa)    
Predicted Functional Partners:
MTO1
Protein MTO1 homolog, mitochondrial.
 0.983
ERGIC1
Endoplasmic reticulum-Golgi intermediate compartment protein 1.
  
 0.929
ERGIC3
Endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform X1.
  
 0.929
ERGIC2
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
  
 0.929
MRPL11
39S ribosomal protein L11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.907
GTPBP8
GTP-binding protein 8 isoform X1.
    
 
 0.902
MRPL21
39S ribosomal protein L21, mitochondrial.
   
 
 0.882
MTG1
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
 
 0.872
TRMU
Mitochondrial tRNA-specific 2-thiouridylase 1.
  
 0.871
MRPL13
39S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.869
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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