STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUM2Pumilio homolog 2 isoform X8. (1067 aa)    
Predicted Functional Partners:
NANOS1
Nanos homolog 1; Belongs to the nanos family.
   
 
 0.911
GAK
cyclin-G-associated kinase isoform X1.
   
 0.762
NANOS3
Nanos homolog 3; Belongs to the nanos family.
   
 
 0.740
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X1.
   
 
 0.726
KHSRP
LOW QUALITY PROTEIN: far upstream element-binding protein 2.
   
 
 0.724
TEKT1
Tektin-1.
      
 0.721
LOC101367232
Transmembrane protein C16orf54 homolog.
      
 0.712
NIPBL
Nipped-B protein.
   
    0.692
LOC101364805
Cytochrome c oxidase copper chaperone.
    
 
 0.673
SCAF11
Protein SCAF11.
   
    0.668
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.