STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYSMD4lysM and putative peptidoglycan-binding domain-containing protein 4 isoform X1. (327 aa)    
Predicted Functional Partners:
FAM174B
Membrane protein FAM174B.
      
 0.893
ST8SIA2
Alpha-2,8-sialyltransferase 8B isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.763
LYSMD2
lysM and putative peptidoglycan-binding domain-containing protein 2 isoform X1.
      
 0.740
MFSD3
Major facilitator superfamily domain-containing protein 3.
      
 0.452
RERG
Ras-related and estrogen-regulated growth inhibitor isoform X1.
      
 0.451
ST8SIA4
CMP-N-acetylneuraminate-poly-alpha-2, 8-sialyltransferase; Belongs to the glycosyltransferase 29 family.
      
 0.446
RPL9
60S ribosomal protein L9.
      
 0.438
LOC101373823
LOW QUALITY PROTEIN: uncharacterized protein LOC101373823.
      
 0.438
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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