STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105757734Basic proline-rich protein-like. (315 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 0.749
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.745
PBRM1
Protein polybromo-1 isoform X1.
    
 0.731
ACTL6A
Actin-like protein 6A isoform X1; Belongs to the actin family.
   
 0.634
ACTL6B
Actin-like protein 6B; Belongs to the actin family.
   
 0.634
SMARCC1
SWI/SNF complex subunit SMARCC1.
   
 0.583
SMARCC2
SWI/SNF complex subunit SMARCC2 isoform X1.
   
 0.583
ARID1A
AT-rich interactive domain-containing protein 1A isoform X1.
   
 0.563
ARID1B
AT-rich interactive domain-containing protein 1B.
   
 0.563
LOC101368152
UPF0450 protein C17orf58 homolog.
 
      0.550
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.