STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC4Homeobox protein Hox-C4. (263 aa)    
Predicted Functional Partners:
HOXC5
Homeobox protein Hox-C5.
   
 
0.859
HOXC6
Homeobox protein Hox-C6 isoform X1.
   
 
0.835
HOXB6
Homeobox protein Hox-B6.
  
 
0.818
HOXB5
Homeobox protein Hox-B5.
   
 
0.810
HOXB7
Homeobox protein Hox-B7.
   
 
0.677
HOXA6
Homeobox protein Hox-A6.
   
 
0.676
HOXD4
Homeobox protein Hox-D4.
  
 
0.672
HOXA7
Homeobox protein Hox-A7.
   
 
0.655
PBX3
pre-B-cell leukemia transcription factor 3 isoform X1.
    
 0.597
PBX1
pre-B-cell leukemia transcription factor 1 isoform X1.
    
 0.597
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.