STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPNA6Importin subunit alpha; Functions in nuclear protein import. (502 aa)    
Predicted Functional Partners:
KPNB1
Importin subunit beta-1 isoform X1.
   
 0.961
ZBTB25
Zinc finger and BTB domain-containing protein 25.
   
 0.775
DNAJB4
dnaJ homolog subfamily B member 4.
   
 
 0.770
USP33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.755
STK40
Serine/threonine-protein kinase 40.
   
  
 0.738
SOAT1
LOW QUALITY PROTEIN: sterol O-acyltransferase 1; Belongs to the membrane-bound acyltransferase family.
   
  
 0.711
VAC14
Protein VAC14 homolog.
      
 0.704
CTC1
CST complex subunit CTC1.
      
 0.703
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 
 0.680
YARS
Tyrosine--tRNA ligase.
   
  
 0.674
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.