STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101375095Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (244 aa)    
Predicted Functional Partners:
PPIA
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  
 
0.902
AIFM1
Apoptosis-inducing factor 1, mitochondrial isoform X1.
    
 0.857
LOC101366045
Histone H2A; Belongs to the histone H2A family.
   
 0.695
LOC101364558
Histone H2A; Belongs to the histone H2A family.
   
 0.695
LOC101385433
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.694
LOC101363426
60S ribosomal protein L3 isoform X1; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.671
RPL3
LOW QUALITY PROTEIN: 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.671
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
  
 0.664
LOC101379001
60S ribosomal protein L4 isoform X1.
  
 
 0.664
LOC101363702
Histone H2A; Belongs to the histone H2A family.
   
  0.657
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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