STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTMR1Myotubularin-related protein 1 isoform X3. (606 aa)    
Predicted Functional Partners:
FIG4
Polyphosphoinositide phosphatase.
     
 0.932
SACM1L
Phosphatidylinositide phosphatase SAC1 isoform X1.
   
 
 0.927
PIKFYVE
1-phosphatidylinositol 3-phosphate 5-kinase isoform X1.
     
 0.925
INPP4A
Type I inositol 3,4-bisphosphate 4-phosphatase isoform X1.
   
 
 0.924
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.916
INPP4B
Type II inositol 3,4-bisphosphate 4-phosphatase.
   
 
 0.913
TMEM55B
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
 
   
 0.904
TMEM55A
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
 
   
 0.903
INPP5F
Phosphatidylinositide phosphatase SAC2.
     
 0.901
PIK3C2B
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta; Belongs to the PI3/PI4-kinase family.
    
 0.740
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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