STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF782LOW QUALITY PROTEIN: zinc finger protein 782. (1017 aa)    
Predicted Functional Partners:
GXYLT1
Glucoside xylosyltransferase 1 isoform X1.
      
 0.615
CATSPERB
Cation channel sperm-associated protein subunit beta.
      
 0.527
EXD1
LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing protein 1.
      
 0.524
UTP14A
U3 small nucleolar RNA-associated protein 14 homolog A isoform X1.
      
 0.521
U2SURP
U2 snRNP-associated SURP motif-containing protein.
      
 0.515
SEPT8
Septin-8 isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
      
 0.515
PCYOX1L
Prenylcysteine oxidase-like.
      
 0.443
ZSCAN9
LOW QUALITY PROTEIN: zinc finger and SCAN domain-containing protein 9.
      
0.437
TRIM28
Transcription intermediary factor 1-beta isoform X1.
   
 0.414
LOC101362126
Cathepsin L1; Belongs to the peptidase C1 family.
    
 
 0.401
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.