STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD4FYVE, RhoGEF and PH domain-containing protein 4 isoform X1. (935 aa)    
Predicted Functional Partners:
SH3TC2
SH3 domain and tetratricopeptide repeat-containing protein 2.
      
 0.764
UTP11L
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.722
ITFG3
Protein ITFG3.
      
 0.722
GDAP1
Ganglioside-induced differentiation-associated protein 1 isoform X1; Belongs to the GST superfamily.
      
 0.717
SBF2
Myotubularin-related protein 13 isoform X1.
   
  
 0.677
RNF122
RING finger protein 122.
      
 0.616
PIGN
GPI ethanolamine phosphate transferase 1.
   
    0.611
APEH
Acylamino-acid-releasing enzyme.
      
 0.598
LOC101362972
Mitochondrial inner membrane protein COX18 isoform X1.
      
 0.524
FNDC3B
Fibronectin type III domain-containing protein 3B.
      
 0.523
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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