STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASTCalpastatin. (799 aa)    
Predicted Functional Partners:
CAPN2
Calpain-2 catalytic subunit; Belongs to the peptidase C2 family.
   
 0.808
CAPN8
LOW QUALITY PROTEIN: calpain-8; Belongs to the peptidase C2 family.
   
 0.808
CAPN1
Calpain-1 catalytic subunit; Belongs to the peptidase C2 family.
   
 0.803
CAPNS2
Calpain small subunit 2.
   
 0.803
CAPNS1
Calpain small subunit 1.
   
 0.803
CAPN14
Calpain-14; Belongs to the peptidase C2 family.
   
 0.803
CAPN11
Calpain-11; Belongs to the peptidase C2 family.
   
 0.790
CAPN3
Calpain-3 isoform X1; Belongs to the peptidase C2 family.
   
 0.759
CAPN9
Calpain-9 isoform X1; Belongs to the peptidase C2 family.
   
 0.759
TOMM20L
TOMM20-like protein 1.
      
 0.750
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.