STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NINNinein isoform X1. (2134 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain-containing protein 68.
    
 
 0.851
CCDC120
Coiled-coil domain-containing protein 120 isoform X1.
    
 
 0.768
CEP290
Centrosomal protein of 290 kDa isoform X1.
    
 
 0.756
CEP170
Centrosomal protein of 170 kDa isoform X1.
    
 
 0.754
BBS4
Bardet-Biedl syndrome 4 protein.
    
 
 0.753
ARL13B
ADP-ribosylation factor-like protein 13B isoform X1.
      
 0.749
CEP250
Centrosome-associated protein CEP250.
    
 
 0.742
IFT88
Intraflagellar transport protein 88 homolog.
    
 
 0.741
HAUS6
HAUS augmin-like complex subunit 6 isoform X1.
    
 0.722
NPHP4
Nephrocystin-4.
      
 0.716
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.