STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CICProtein capicua homolog isoform X1. (2530 aa)    
Predicted Functional Partners:
ATXN1
Ataxin-1.
    
 
 0.971
ATXN1L
Ataxin-1-like.
    
 
 0.718
PAFAH1B2
Platelet-activating factor acetylhydrolase IB subunit beta.
   
  
 0.702
PRRC2A
Protein PRRC2A.
   
    0.691
PAFAH1B3
Platelet-activating factor acetylhydrolase IB subunit gamma isoform X1.
   
  
 0.623
HIPK1
Homeodomain-interacting protein kinase 1.
   
  
 0.525
ATN1
Atrophin-1 isoform X1.
   
  
 0.523
LOC101369717
Protein Hikeshi.
      
 0.523
UBAP1
Ubiquitin-associated protein 1 isoform X1.
      
 0.522
BHLHE41
Class E basic helix-loop-helix protein 41.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.