STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPXNLeupaxin isoform X1; Belongs to the paxillin family. (415 aa)    
Predicted Functional Partners:
VCL
Vinculin isoform X1.
   
 0.852
PTK2
Focal adhesion kinase 1 isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.828
PTK2B
Protein-tyrosine kinase 2-beta isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.801
BCAR1
Breast cancer anti-estrogen resistance protein 1 isoform X2.
    
 0.781
GIT1
ARF GTPase-activating protein GIT1 isoform X1.
    
 
 0.779
PARVA
Alpha-parvin.
   
 0.746
PARVB
Beta-parvin.
   
 0.746
CRK
Adapter molecule crk isoform X1.
    
 0.735
FERMT1
Fermitin family homolog 1.
    
 
 0.683
FERMT2
Fermitin family homolog 2 isoform X1.
    
 
 0.681
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.