STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN6Tetraspanin. (229 aa)    
Predicted Functional Partners:
SH2D7
SH2 domain-containing protein 7.
      
 0.722
FRMPD4
FERM and PDZ domain-containing protein 4.
      
 0.676
RAB14
Ras-related protein Rab-14.
    
 0.645
PICK1
PRKCA-binding protein.
     
 0.624
SEZ6L2
Seizure 6-like protein 2 isoform X1.
   
  
 0.623
TSPAN31
Tetraspanin-31; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.555
TMEM45B
Transmembrane protein 45B.
      
 0.541
LOC101375339
Melanoma-associated antigen D2.
   
  
 0.539
ATPAF1
ATP synthase mitochondrial F1 complex assembly factor 1 isoform X1.
      
 0.525
LRMP
Lymphoid-restricted membrane protein isoform X1.
   
  
 0.525
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.