STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEACAM18Carcinoembryonic antigen-related cell adhesion molecule 18. (395 aa)    
Predicted Functional Partners:
CEACAM19
Carcinoembryonic antigen-related cell adhesion molecule 19.
      
 0.739
RPTN
Repetin.
  
 
 0.518
FAM63B
Protein FAM63B isoform X1.
      
 0.451
TM4SF20
Transmembrane 4 L6 family member 20.
      
 0.450
HIF3A
Hypoxia-inducible factor 3-alpha isoform X1.
    
 0.442
IFT81
Intraflagellar transport protein 81 homolog isoform X2.
    
 0.439
CTU1
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position; Belongs to the TtcA family. CTU1/NCS6/ATPBD3 subfamily.
      
 0.439
PVR
Poliovirus receptor.
    
 
 0.438
SSFA2
Sperm-specific antigen 2 isoform X1.
      
 0.437
ZFAT
Zinc finger protein ZFAT isoform X1.
    
 0.428
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.