STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101371539LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like. (467 aa)    
Predicted Functional Partners:
LOC101366285
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
  
  0.946
LOC101383463
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.932
LOC101374463
LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.931
LOC101385473
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
  
  0.878
LOC101364182
LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.877
UNC79
Protein unc-79 homolog isoform X1.
   
 0.860
CACNB4
Voltage-dependent L-type calcium channel subunit beta-4 isoform X1.
   
 0.768
CACNB3
Voltage-dependent L-type calcium channel subunit beta-3 isoform X1.
   
 0.762
LOC101376065
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.726
CACNB2
Voltage-dependent L-type calcium channel subunit beta-2 isoform X1.
   
 0.699
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.