STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101364182LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like. (489 aa)    
Predicted Functional Partners:
LOC101383463
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.933
LOC101376065
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.932
LOC101366285
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.918
LOC105758187
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.891
LOC101371539
LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.877
LOC101386822
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.875
LOC101362725
LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.874
LOC101379293
LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.871
LOC101379123
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
 
   
  0.870
UNC79
Protein unc-79 homolog isoform X1.
   
 0.860
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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