STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYRM1LYR motif-containing protein 1 isoform X1; Belongs to the complex I LYR family. (168 aa)    
Predicted Functional Partners:
EEF2
Elongation factor 2.
    
 0.703
B9D1
B9 domain-containing protein 1.
    
 0.653
B9D2
B9 domain-containing protein 2.
    
 0.644
TMEM67
Meckelin.
   
 
 0.606
AHI1
Jouberin.
    
 0.594
MKS1
Meckel syndrome type 1 protein.
    
 0.580
TCTN2
Tectonic-2.
    
 0.555
KIN
DNA/RNA-binding protein KIN17.
    
 0.555
TMEM80
Transmembrane protein 80.
     
 0.521
TMEM216
Transmembrane protein 216 isoform X1.
     
 0.521
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.