STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101372259LOW QUALITY PROTEIN: carcinoembryonic antigen-related cell adhesion molecule 6-like. (516 aa)    
Predicted Functional Partners:
TGFB1
Transforming growth factor beta-1.
   
 0.590
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
   
 0.561
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1.
   
 0.560
RELA
Transcription factor p65.
   
 0.554
REL
Proto-oncogene c-Rel.
   
 0.554
RELB
Transcription factor RelB.
   
 0.554
TMPRSS3
Transmembrane protease serine 3 isoform X1; Belongs to the peptidase S1 family.
    
 0.492
TMPRSS2
Transmembrane protease serine 2; Belongs to the peptidase S1 family.
    
 0.476
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
   
 0.473
DPP4
Dipeptidyl peptidase 4; Belongs to the peptidase S9B family.
    
 
 0.458
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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