STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101371070LOW QUALITY PROTEIN: interstitial collagenase-like. (469 aa)    
Predicted Functional Partners:
MMP3
Stromelysin-1.
  
 
0.959
LOC101369292
Interstitial collagenase-like.
  
  
 
0.901
TIMP1
Metalloproteinase inhibitor 1.
   
 0.789
MMP2
72 kDa type IV collagenase.
   
 
0.664
MMP26
Matrix metalloproteinase-26.
  
 
0.641
MMP20
Matrix metalloproteinase-20.
  
 
0.629
MMP12
Macrophage metalloelastase.
  
 
0.620
MMP9
Matrix metalloproteinase-9.
  
0.610
TIMP3
Metalloproteinase inhibitor 3 isoform X1.
   
 0.601
LOC101370237
Metalloproteinase inhibitor 2.
   
 0.598
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.